BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F06SP1|AL425154
(968 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1622 0.0
>3x_Contig1461
Length = 5478
Score = 1622 bits (817), Expect = 0.0
Identities = 942/976 (96%), Gaps = 8/976 (0%)
Strand = Plus / Plus
Query: 1 atcaaccagataactatcttatgaagcagtatccacaagtcttaacaacaaatgctgtca 60
|||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 2025 atcaaccaaataaatatcttatgaagcagtatccacaattcttaacaacaaatgctctca 2084
Query: 61 agtcccgcatcaactgtcgcagatattttatcatgattagaaatgcaagtaaggaaacaa 120
| ||||||||||||| ||||| |||||||||||| |||| ||||||||||||||||||||
Sbjct: 2085 actcccgcatcaactttcgcatatattttatcattattataaatgcaagtaaggaaacaa 2144
Query: 121 gtttccatactcgcgtcggaagcaacaattcaacagtttttacactatcaaatcatcaca 180
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2145 ttttccatactcgcttcaaaagcaacaattcaacagtttttacactatcaaatcatcaca 2204
Query: 181 acccctccatgccatagcactctttgagtttcctctaaccgacttccactgaacactgct 240
|||||||||| |||||||||||||| | |||||||||||| |||||||||||||||||||
Sbjct: 2205 acccctccattccatagcactctttaattttcctctaaccaacttccactgaacactgct 2264
Query: 241 ccgatgtttcgcagaaacagaa-cgttcaatatcatc-ggccaaagagga-ggttacact 297
|| || ||||||| |||||||| |||||||||||||| |||||||||||| |||||||||
Sbjct: 2265 ccaatttttcgcaaaaacagaaacgttcaatatcatccggccaaagaggaaggttacact 2324
Query: 298 cacagaatcacagacaaccaaagtcgcccggctattctgtaaggcattcccccaaatatg 357
|||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2325 cacaaaatcacaaacaaccaaagtcgccccgctattctgtaaggcattcccccaaatatg 2384
Query: 358 gtttctttggtttggattgccattggctagtaatccaccaaatcctccactgctcgccaa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2385 gtttctttggtttggattgccattggctagtaatccaccaaatcctccactgctcgccaa 2444
Query: 418 tggaatcgctagatgtccatgacgagactgttcaggcgtcttgcagcatctttcgatgct 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2445 tggaatcgctagatgtccatgacgagactgttcaggcgtcttgcagcatctttcgatgct 2504
Query: 478 gcacacacccatgtcaccgcgctgtatagggccccaggcttgatctgacgatcacctaga 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2505 gcacacacccatgtcaccgcgctgtatagggccccaggcttgatctgacgatcacctaga 2564
Query: 538 aactctctccaccgcgagacgaggccatagtctgttcgacgaacgactacatccaaatct 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2565 aactctctccaccgcgagacgaggccatagtctgttcgacgaacgactacatccaaatct 2624
Query: 598 tactcaagtttgtttccaaactctttccgattcgtcttcaactgctttcgcatgaagtac 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2625 tactcaagtttgtttccaaactctttccgattcgtcttcaactgctttcgcatgaagtac 2684
Query: 658 ctcccggcctatttttctcacccgtggtcttctttctattagccctcacg-ttctatatt 716
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2685 ctcccggcctatttttctcacccgtggtcttctttctattagccctcacgtttctatatt 2744
Query: 717 tcaaaaatgcattcatttttttcatcttctcaataccctctgttatttttttcagtattt 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2745 tcaaaaatgcattcatttttttcatcttctcaataccctctgttatttttttcagtattt 2804
Query: 777 tttcaaatggtaaaattcgcacttttagctttttttcttccccttctttttcatcaacga 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2805 tttcaaatggtaaaattcgcacttttagctttttttcttccccttctttttcatcaacga 2864
Query: 837 ttctcccctttatatacaaatctcgattttcgtttttgtgtttccctttttattttttca 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2865 ttctcccctttatatacaaatctcgattttcgtttttgtgtttccctttttattttttca 2924
Query: 897 ctcctgttaagraggataat-ccactggttgagaagaaa--taaaaaaamaaat-aaaaa 952
||||||||||| |||||||| |||||||||||||||||| ||||||| |||| |||||
Sbjct: 2925 ctcctgttaaggaggataatcccactggttgagaagaaaataaaaaaaacaaataaaaaa 2984
Query: 953 aatacagatggtgatt 968
||||||||||||||||
Sbjct: 2985 aatacagatggtgatt 3000
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8967
Number of Sequences: 1807
Number of extensions: 8967
Number of successful extensions: 143
Number of sequences better than 1.0e-20: 1
length of query: 968
length of database: 10,358,551
effective HSP length: 16
effective length of query: 952
effective length of database: 10,329,639
effective search space: 9833816328
effective search space used: 9833816328
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)